Fluorescence In Situ Hybridization (FISH)

ARUP offers FISH technology as a complement to classical cytogenetic techniques for well-characterized microdeletion/microduplication disorders, such as DiGeorge syndrome, as well as for unique or family-specific imbalances identified by microarray. Testing of oncology specimens, whether the sample is blood, bone marrow, fresh tissue, or paraffin block, is available. Many disease-specific FISH panels, as well as individual probes, can assist in the diagnosis and monitoring of patients with cancer.

Test # Test Name Additional Information Test Keywords
0040208 Aneuploidy Panel by FISH FISH (Constitutional)—Aneuploidy Panels Down, Downs, Down's, Trisomy 21, Trisomy 18, Turner, Turner's, Turners, Klinefelter, Klinefelter's, Klinefelters, trisomy 13, newborn
0040203 Chorionic Villus, FISH FISH (Constitutional)—Aneuploidy Panels Down, Downs, Down's, Trisomy 21, Trisomy 18, Turner, Turner's, Turners, Klinefelter, Klinefelter's, Klinefelters, trisomy 13, prenatal, CVS
2002297 Chromosome FISH, Prenatal FISH (Constitutional)—Aneuploidy Panels Down, Downs, Down's, Trisomy 21, Trisomy 18, Turner, Turner's, Turners, Klinefelter, Klinefelter's, Klinefelters, trisomy 13, prenatal, amnio, amniotic fluid, Insight, PN FISH
2002299 Chromosome FISH, Metaphase

Available probes:
1p36 deletion
4p-
5p-
15q11.2-12 duplication
22qter deletion (SHANK3)
Angelman
Cri-du-chat
DiGeorge
Kallman
Male detection (SRY)
Miller-Dieker (Lisencephaly)
Phelan McDermid
Prader-Willi
SHOX
Smith-Magenis
SRY
Steroid sulfatase deficiency (STS)
Velocardiofacial (VCF)
Williams (elastin)
Wolf-Hirschhorn

Please call a genetic counselor before ordering:
Acrocentric p-arm
X centromere
X inactivation locus (XIST)
Xp22
Y centromere
Yp11.3
Yq12

Please specify which FISH probe you wish to order.

FISH (Constitutional)—Individual Probes 1p36, 4p-, 5p-, angelman, cri-du-chat, DiGeorge, Kallman, SRY, Miller-Dieker, Lisencephaly, Phelan McDermid, Prader-Willi, SHOX, Smith-Magenis, Steroid sulfatase deficiency, STS, Velocardiofacial, VCF, VCFS, Williams, elastin, Wolf-Hirschhorn, Xp22, Centromere, Yq12, Yp11.3, ichthyosis
2002301 Microarray Family Study by FISH

Used to determine the presence of a known deletion or duplication, previously identified by microarray in a family member. If the original array was not performed at ARUP, contact an ARUP genetic counselor prior to sending the sample.

Please call a genetic counselor before ordering. Genomic Microarray (FISH) Array, CGH, aCGH, parental
2002647 Acute Lymphocytic Leukemia (ALL) Panel by FISH, Adult Oncology Studies, FISH—Blood and Bone Marrow Panels B-Cell Lymphoma
2002719 Acute Lymphocytic Leukemia (ALL) Panel by FISH, Pediatric Oncology Studies, FISH—Blood and Bone Marrow Panels Oncology, Bone Marrow , B-Cell Lymphoma, childhood, child, children
2002653 Acute Myelogenous Leukemia (AML) with Myelodysplastic Syndrome (MDS), or Therapy-Related AML, by FISH Oncology Studies, FISH—Blood and Bone Marrow Panels Myelodysplastic, Acute Myeloid Leukemia
2002384 Acute Myelogenous Leukemia Panel by FISH Oncology Studies, FISH—Blood and Bone Marrow Panels Acute Myeloid Leukemia, AML, Myeloproliferative, MPD
2002295 Chromosome FISH, CLL Panel Oncology Studies, FISH—Blood and Bone Marrow Panels Chronic Lymphocytic Leukemia, CLL, Lymphoma Phenotyping, B-Cell Lymphomas, Tumor Markers
2002378 Eosinophilia Panel by FISH Oncology Studies, FISH—Blood and Bone Marrow Panels Mast Cell Disease, Eosinophilic Diseases, Acute Myeloid Leukemia (AML), Myeloproliferative Neoplasms (MPN)
2002650 Lymphoma (Aggressive) Panel by FISH Oncology Studies, FISH—Blood and Bone Marrow Panels Lymphoma Phenotyping, B-Cell Lymphomas, Lymphoproliferative Disorders (LPD)
2002294 Multiple Myeloma Panel by FISH Oncology Studies, FISH—Blood and Bone Marrow Panels Plasma Cell Dyscrasias
2002709 Myelodysplastic Syndrome (MDS) Panel by FISH Oncology Studies, FISH—Blood and Bone Marrow Panels Myelodysplastic Syndrome (MDS)
2002360 Myeloproliferative Disorders Panel by FISH Oncology Studies, FISH—Blood and Bone Marrow Panels Chronic Myelogenous Leukemia (CML), Myeloproliferative Neoplasms (MPN)
2002363 PML/RARα FISH Oncology Studies, FISH—Blood and Bone Marrow Panels Acute Myeloid Leukemia (AML), Tumor Markers
2002298 Chromosome FISH, Interphase

Gene/Probe:
CEP 4
CEP 8
CEP 10
+12
CEP 17
DEL (20q)
CEP X/Y
ALK Break Apart Probe
ASS1
ATM
BCL6 Break Apart Probe
BCR/ABL1/ASS1
CBFB Break Apart Probe
CDKN2
CHOP
C-myc Break Apart Probe
D7S486/CEP 7 (centromere)
D13S319
DDIT3
E2A
EGR1
ETO/AML1 Fusion
EVI1
EVT6/RUNX1
EWSR1 Break Apart Probe
FGFR1
FGFR3/IGH
FOXO1
IGH Break Apart Probe
IGH/BCL2
IGH/CCND1
IGH/MAF
MALT1
MLL Break Apart Probe
MYC Break Apart Probe
P16
P53
PDGFRA
PDGFRB
PML/RARA
RUNX1T1/RUNX1 Fusion
SS18 Break Apart Probe
SYT Break Apart Probe
TCF3
TEL/AML1
TP53
Please specify which FISH probe you wish to order.

Oncology Studies, FISH—Blood and Bone Marrow—by Gene/Probe Oncology, Bone Marrow, Ewing Sarcoma, Neuroblastoma, Myelodysplastic, MDS, Chronic Lymphocytic Leukemia (CLL), Sarcoma, Acute Lymphoblastic Leukemia (ALL), Chronic Myelogenous Leukemia (CML), Tumor Markers, Acute Myeloid Leukemia (AML), Myeloproliferative Neoplasms (MPN), Plasma Cell Dyscrasias, Lymphoma Phenotyping, B-Cell Lymphomas
2002298 Chromosome FISH, Interphase

Location:
2p23 ALK rearrangement
3q27 BCL6 rearrangement
Chromosome 4 gain or loss
4q12 PDGFRA rearrangement
Chromosome 5q deletion
5q32 PDGFRB rearrangement
Chromosome 7q deletion/Monosomy 7
Chromosome 8 gain or loss
8p12
8q24
9p21 deletion
9q34
Chromosome 10 gain or loss
11q23
Trisomy 12
14q32
Chromosome 17 gain or loss
17p13.1 deletion
18q11.2 (Synovial sarcoma) rearrangement
19p13 Rearrangement
Chromosome 20q Deletion
22q12.2 (Ewing Sarcoma) rearrangement
Chromosomes X & Y Centromere
del(11)(q22.3) deletion
del(13)(q14.3) deletion
inv(16)(p13.3q22) CBFB rearrangement
t(11;14)(q12;q32) fusion
t(12;21)(p13;q22) fusion
t(14;16)(q32;q23.1) fusion
t(14;18)(q32;q21) fusion
t(15;17)(q22;q21) fusion
t(4;14)(p16;q32) fusion
t(8;21)(q22;q22) fusion
t(9;22)(q34;q11.2) Fusion
Please specify which FISH probe you wish to order.

Oncology Studies, FISH—Blood and Bone Marrow—by Location Oncology FISH Studies, Blood and Bone Marrow, Ewing Sarcoma, Neuroblastoma, Myelodysplastic Syndromes, Chronic Lymphocytic Leukemia (CLL), Sarcoma, Acute Lymphoblastic Leukemia (ALL), Chronic Myelogenous Leukemia (CML), Tumor Markers, Acute Myeloid Leukemia (AML), Myeloproliferative Neoplasms (MPN), Plasma Cell Dyscrasias, Lymphoma Phenotyping, B-Cell Lymphomas
2002461 Pancreatobiliary FISH Oncology Studies, FISH—Other Pancreatic Cancer, Tumor Markers
8100600 UroVysion™ FISH Oncology Studies, FISH—Other Bladder Cancer, Tumor Markers, urine
0049360 1p/19q d(1:19) Deletion by FISH Oncology Studies, FISH—Paraffin Block Oncology, Paraffin, Brain Tumors, Tumor
0049378 CHOP Gene Rearrangement Oncology Studies, FISH—Paraffin Block Sarcoma
0049335 EWSR1 Break Apart Rearrangement by FISH Technical Bulletin Oncology Studies, FISH—Paraffin Block Ewing Sarcoma, Sarcoma, Tumor Markers
2001497 FKHR Gene Rearrangement by FISH Oncology Studies, FISH—Paraffin Block Sarcoma, FOX, FOXO1
2002345 LSI MYC t(8q;24) by FISH Technical Bulletin Oncology Studies, FISH—Paraffin Block B-Cell Lymphomas, Tumor Markers
0049234 EGFR by FISH Technical Bulletin Oncology Studies, FISH—Paraffin Block Head and Neck Cancer, Lung Cancer
0049218 HER-2/neu (PathVysion HER-2) Oncology Studies, FISH—Paraffin Block Breast Cancer, Tumor Markers, FISH, herceptin, HER2, HER-2, neu, HER2/neu
0049381 IgH-CCND1, t(11:14) Translocation by FISH Oncology Studies, FISH—Paraffin Block Lymphoma Phenotyping, B-Cell Lymphomas, Tumor Markers
2001536 IGH/BCL2 t(14;18) by FISH for Detection in Follicular Lymphoma Oncology Studies, FISH—Paraffin Block Plasma Cell Dyscrasias, Lymphoma Phenotyping, B-Cell Lymphomas
2001538 IGH/MYC, CEP8 t(8;14) by FISH for Detection in Burkitt Lymphoma Technical Bulletin Oncology Studies, FISH—Paraffin Block Lymphoma Phenotyping, B-Cell Lymphomas
2003016 Murine Double Minute 2 by FISH Technical Bulletin Oncology Studies, FISH—Paraffin Block Sarcoma, Tumor Markers, MDM2
0049235 N-myc by FISH Technical Bulletin Oncology Studies, FISH—Paraffin Block Neuroblastoma, Tumor Markers
0049380 SYT Rearrangement by FISH Technical Bulletin Oncology Studies, FISH—Paraffin Block Sarcoma, Tumor Markers