ARUP Journal Article Publications Archive—2012

The Institute for Clinical and Experimental Research® is focused on the development of new diagnostic assays in a wide range of disciplines. Researchers at the institute regularly publish in respected, peer-reviewed journals, give presentations at national and international organizations, author books and book chapters, and develop new tests.

There are 171 total entries for the year 2012.

Couturier MR. Evolving challenges in Helicobacter pylori disease, diagnostics, and treatment. Clinical Microbiology Newsletter 2012;.
Grenache DG. Human chorionic gonadotropin. ASCP CheckSample Series- Clinical Chemistry 2012;52(7), 81–97.
Khot PD, Fisher MA. Mass Spectrometry in the Clinical Microbiology Laboratory, Part I: PCR-MS. Clinical Microbiology Newsletter 2012;34(17)135–140.
Khot PD, Fisher MA. Mass spectrometry in the clinical microbiology laboratory, part II: MALDI-TOF MS. Clinical Microbiology Newsletter 2012;34(18)143–147.
Margraf RL, Pattison DC, Voelkerding KV, Rong M. NULLNovel p.C620L RET Mutation Detected in a Patient with Medullary Thyroid Carcinoma. NULInternational Journal of Clinical MedicineL 2012;3(6):498–501.
Schmidt RL, Schlaberg R, Hanson KE. (1>3)6-D-glucan testing for the detection of invasive fungal infections in immunocompromised patients. The Cochrane Library 2012;Issue 5.
Pyne MT, Hillyard DR. Performance of the COBAS® AmpliPrep/COBAS TaqMan® automated system for hepatitis C virus (HCV) quantification in a multi-center comparison. Journal of Clinical Virology 2012;50(2):100–3.
Welker NC. Dynamic linear model for the identification of miRNAs in next-generation sequencing data. Biometrics 2012;67(4):1206–14.
Layfield LJ. Fine-needle aspiration diagnosis of an intraosseous amyloidoma. Diagnostic Cytopathology 2012;40 Suppl 2:E114–7.
South ST. Fine-grained facial phenotype-genotype analysis in Wolf-Hirschhorn syndrome. European Journal of Human Genetics 2012;20(1):33–40.
Shetty S. Spindle cell variant of multiple myeloma: immunophenotype and cytogenetics abnormalities. Annals of Hematology 2012;91(5):803–4.
Ardon O, Pasquali M, Longo N.. Genotype-phenotype correlation in primary carnitine deficiency. Human Mutation 2012;33(1):118–23.
Rodgers GM. Enoxaparin once daily vs. twice daily dosing for the treatment of venous thromboembolism in cancer patients: a literature summary. Journal of Oncology Pharmacy Practice 2012;18(2):264–70.
Kushnir MM, Crockett DK, Cloud JL, Ashwood ER, Rockwood AL. Exploratory study of proteins in urine of patients with histoplasma antigenuria. Journal of Chromatography B- Analytical Technologies in the Biomedical and Life Sciences 2012;883–884:147–54.
Strathmann FG. 3-epi-25 hydroxyvitamin D concentrations are not correlated with age in a cohort of infants and adults. Clinica Chimica Acta 2012;413(1–2):203–6.
Prchal J. Pulmonary artery pressure and iron deficiency in patients with up-regulation of hypoxia sensing due to homozygous VHLR200W mutation (Chuvash polycythemia). Haematologica 2012;97(2):193–200.
Salama ME. Interstitial Volume Modulates the Conduction Velocity- Gap Junction Relationship. American Journal of Physiology - Heart and Circulatory Physiology 2012;302(1):H278–86.
Baker CL, Vaughn CP, Samowitz WS. A PIK3CA pyrosequencing-based assay that excludes pseudogene interference. Journal of Molecular Diagnostics 2012;14(1):56–60.
Preobrazhensky SN, Szankasi P, Bahler DW. Improved flow cytometric detection of ZAP-70 in chronic lymphocytic leukemia using experimentally optimized isotypic control antibodies. Cytometry Part B- Clinical Cytometry 2012;82(2):78–84.
Bayrak-Toydemir P. Brain arteriovenous malformation multiplicity predicts the diagnosis of hereditary hemorrhagic telangiectasia: quantitative assessment. Stroke 2012;43(1):72–8.
Crockett DK, Lyon E. Utility of gene-specific algorithms for predicting pathogenicity of uncertain gene variants. Journal of the American Informatics Association 2012;19(2):207–11.
Pickering JW, Hill HR. Measurement of Antibodies to Pneumococcal Polysaccharides with Luminex xMAP Microsphere-Based Liquid Arrays. Methods in Molecular Biology 2012;808:361–75.
Bronner MP. Prediction of adenocarcinoma in esophagectomy specimens based upon analysis of preresection biopsies of Barrett esophagus with at least high-grade dysplasia: a comparison of 2 systems. American Journal of Surgical Pathology 2012;36(1):134–41.
Prchal JT. Genetic determinants of Tibetan high-altitude adaptation. Human Genetics 2012;131(4):527–33.
Pavlov IY, Delgado JC. High Soluble CD30, CD25, and IL-6 May Identify Patients with Worse Survival in CD30+ Cutaneous Lymphomas and Early Mycosis Fungoides. Journal of Investigative Dermatology 2012;132(3 Pt 1):703–10.
Bronner MP. Composite intestinal adenoma-microcarcinoid. American Journal of Surgical Pathology 2012;36(2):292–5.
Hanson K, South ST. Towards an Evidence-based Process for the Clinical Interpretation of Copy Number Variation. Clinical Genetics 2012;81(5):403–12.
Slechta ES, Hanson KE. Internal transcribed spacer region sequence analysis using SmartGene IDNS software for the identification of unusual clinical yeast isolates. Medical Mycology 2012;50(5):458–66.
Millson A, Rowe LR, Lyon E, South ST. Chromosomal loss of 3q26.3-3q26.32, involving a partial neuroligin 1 deletion, identified by genomic microarray in a child with microcephaly, seizure disorder, and severe intellectual disability. American Journal of Medical Genetics Part A 2012;158A:159–165.
Profaizer T. HLA alleles and drug hypersensitivity reactions. International Journal of Immunogenetics 2012;39/99–105.
Juenke JM, McMillin GA, Johnson-Davis KL. Performance characteristics and patient comparison of the ARK Diagnostics levetiracetam immunoassay with an ultra-high performance liquid chromatography with tandem mass spectrometry detection method. Clinica Chimica Acta 2012;413(3–4):529–31.
Ebbert MT, Bernard PS. TRIM29 functions as a tumor suppressor in nontumorigenic breast cells and invasive ER+ breast cancer. American Journal of Pathology 2012;180(2):839–47.
Meikle WA. Updates on the relation of weight excess and reproductive function in men: sleep apnea as a new area of interest. Asian Journal of Andrology 2012;14(1):77–81.
Roberts WL. Specificity characteristics of 7 commercial creatinine measurement procedures by enzymatic and Jaffe method principles. Clinical Chemistry 2012;58(2):391–401.
Wilson AR, Layfield LJ. Methods specification for diagnostic test accuracy studies in fine-needle aspiration cytology: a survey of reporting practice. American Journal of Clinical Pathology 2012;137(1):132–41.
McMillin GA. Pharmacogenetic warfarin dose refinements remain significantly influenced by genetic factors after one week of therapy. Journal of Thrombosis and Haemostasis 2012;107(2):232–40.
Wilson A, Roberts WL, McMillin GA. Pediatric reference intervals for serum copper and zinc. Clinica Chimica Acta 2012;413(5–6):612–5.
Martins T, Hill HR, Schumacher J, Willmore C. Exploiting antitumor immunity to overcome relapse and improve remission duration. Cancer Immunology Immunotherapy 2012;61(7):1113–24.
Wooderchak-Donahue W, Bayrak-Toydemir P. RASA1 analysis: clinical and molecular findings in a series of consecutive cases. European Journal of Medical Genetics 2012;55(2):91–5.
Strathmann F. Multiplex immunoassays of peptide hormones extracted from formalin-fixed, paraffin-embedded tissue accurately subclassify pituitary adenomas. Clinical Chemistry 2012;58(2):366–74.
Couturier MR, Slechta ES, Fisher MA, Hanson KE. Leptotrichia bacteremia in patients receiving high dose chemotherapy. Journal of Clinical Microbiology 2012;50(4):1228–32.
Schlaberg R,Taggart EW, She RC. Verification of performance specifications for a US Food and Drug Administration-approved molecular microbiology test: Clostridium difficile cytotoxin B using the Becton, Dickinson and Company GeneOhm Cdiff assay. Archives of Pathology and Laboratory Medicine 2012;136(1):20–5.
Pont-Kingdon G, Gedge F, Donahue W, Bayrak- Toydemir P, Lyon E. Design and analytical validation of clinical DNA sequencing assays. Archives of Pathology and Laboratory Medicine 2012;136(1):41–6.
Wallander ML, Tripp S, Layfield LJ. MDM2 amplification in malignant peripheral nerve sheath tumors correlates with p53 protein expression. Applied Immunohistochemistry and Molecular Morphology 2012;136(1):95–9.
Perkins SL. Primary follicular lymphoma of the testis in children and adolescents. American Journal of Pediatric Hematology/ Oncology 2012;34(1):68–71.
Greene DN, Procter M, Mao R, Lyon E, Grenache DG. a1-Antitrypsin Deficiency in Fraternal Twins Born With Familial Spontaneous Pneumothorax. CHEST 2012;141(1):239–241.
Delgado JC. Higher SLPI expression, lower immune activation and increased frequency of immune cells in a cohort of Colombian HIV-1 controllers. Journal of Acquired Immune Deficiency Syndromes 2012;60(1):12–9..
Delgado JC, Ravkov E, Pavlov IY. Penaeus monodon tropomyosin induces CD4 T-cell proliferation in shrimp-allergic patients. Human Immunology 2012;73(4):426–31.
Roberts WL. Effects of hemoglobin C, D, E, and S traits on measurements of HbA(1c) by six methods. Clinica Chimica Acta 2012;413(7–8):819–21.
Lehman CM, Thompson C, Grenache DG. Should the qualitative serum pregnancy test be considered obsolete? American Journal of Clinical Pathology 2012;137(2):194–202.
Agarwal N, Wilson A, Prchal JT. Methylation of AR locus does not always reflect X chromosome inactivation state. Blood 2012;119(13):e100–9.
Agarwal AM, Nussenzveig R. Commentary. Clinical Chemistry 2012;58(2):335–6.
Smock KJ, Rodgers GM. An inherited disorder with splenomegaly, cytopenias, and vision loss. American Journal of Medical Genetics A 2012;158A(3):475–81.
McMillin GA, Johnson-Davis K. Analytical performance of a new liquid chromatography/tandem mass spectrometric method for determination of everolimus concentrations in whole blood. Therapeutic Drug Monitoring 2012;34(2):222–6.
Slev PR. Experimental viral evolution to specific host MHC genotypes reveals fitness and virulence trade-offs in alternative MHC types. Proceedings of the National Academy of Sciences of the United States of America 2012;109(9):3422–7.
Kushnir MM. Higher than expected estradiol levels in aromatase inhibitor-treated, postmenopausal breast cancer patients. Journal of Clinical Endocrinology and Metabolism 2012;15(5):473–80.
Mallempati KC, Wilson A, Salama ME. Utility of a column-free cell sorting system for separation of plasma cells in multiple myeloma FISH testing in clinical laboratories. International Journal of Hematology 2012;95(3):274–81.
Layfield LJ. Metastatic disease to the pancreas documented by endoscopic ultrasound guided fine-needle aspiration: A seven-year experience. Diagnostic Cytopathology 2012;40(3):228–33.
McMillin GA, Marin SJ. Patterns of free (unconjugated) buprenorphine, norbuprenorphine, and their glucuronides in urine using liquid chromatography-tandem mass spectrometry. Journal of Analytical Toxicology 2012;36(2):81–7.
Jarboe EA, Layfield LJ. Cytomorphologic diagnosis and HPV testing of metastatic and primary oropharyngeal squamous cell carcinomas: A review and summary of the literature. Diagnostic Cytopathology 2012;40(6):491–7.
Layfield LJ, Wallander ML. Diagnosis of gastrointestinal stromal tumors from minute specimens: Cytomorphology, immunohistochemistry, and molecular diagnostic findings. Diagnostic Cytopathology 2012;40(6):484–90.
Roberts WL. The effect of increased fetal hemoglobin on 7 common hb a1c assay methods. Clinical Chemistry 2012;58(5):945–7.
Sumner K, Hubley L, Pont-Kingdon G, Mitchell S, Wilson A, Elenitoba-Johnson K, Pattison D, Dobrowolski S, Best H, Lyon E. Validation of an Unlabeled Probe Melting Analysis Assay Combined with High-Throughput Extractions for Genotyping of the Most Common Variants in HFE-Associated Hereditary Hemochromatosis, C282Y, H63D, and S65C. Genetic Testing Molecular Biomarkers 2012;16(7):656–60.
Reading NS, Perkins S, Prchal JT. Hemolysis and Mediterranean G6PD mutation (c.563 C>T) and c.1311 C>T polymorphism among Palestinians at Gaza Strip. Blood Cells, Molecules, and Diseases 2012;48(4):203–8.
Delgado JC. A Potent Vaccination Strategy that Circumvents Lymphodepletion for Effective Anti-Tumor Adoptive T Cell Therapy. Cancer Research 2012;72(8):1986–95.
Perkins SL. Molecular distinctions between pediatric and adult mature B-cell non-Hodgkin lymphomas identified through genomic profiling. Blood 2012;119(16):3757–66.
Schlaberg R, Fisher MA. A systematic approach for discovering novel, clinically relevant bacteria. Emerging Infectious Diseases 2012;18(3):422–30.
Procter M, Grenache DG, Mao R. A patient with prolonged paralysis. Clinical Chemistry 2012;58(3):496–500.
Augustine NH, Wittwer CT, Hill H. Rare Duplication or Deletion of Exons 6, 7 and 8 in CYBB Leading to X-Linked Chronic Granulomatous Disease in Two Patients from Different Families. Journal of Clinical Immunology 2012;32(4):653–62.
Roberts WL. Racial Differences in Markers of Mineral Metabolism in Advanced Chronic Kidney Disease. Clinical Journal of American Society of Nephrology 2012;7(4):640–7.
Martins TB, Hill HR, Kjeldsberg CR. Different doses of supplemental vitamin D maintain interleukin-5 without altering skeletal muscle strength: a randomized, double-blind, placebo-controlled study in vitamin D sufficient adults. Nutrition & Metabolism 2012;9(1):16.
Cohen MB. P53 and the proteasome regulate androgen receptor activity. Cancer Biology and Therapy 2012;13(7):553–8.
Kushnir MM. Sex steroid levels temporarily increase in response to acute psychosocial stress in healthy men and women. International Journal of Psychophysiology 2012;84(3):246–53.
Khot PD. Enhanced fungal DNA-extraction from formalin-fixed, paraffin-embedded tissue specimens by application of thermal energy. Medical Mycology 2012;50(6):667–72.
Ray JA, Kushnir MM, Bunker AM, Rockwood AL, Meikle AW. Direct measurement of free estradiol in human serum by equilibrium dialysis-liquid chromatography-tandem mass spectrometry and reference intervals of free estradiol in women. Clinica Chimica Acta 2012;413(11–12):1008–14.
Pavlov IY, Wilson AR, Delgado JC. Reference Interval Computation: which method (not) to choose? Clinica Chimica Acta 2012;413(13–14):1107–14.
Kushnir MM. DHEA and DHEA-S response to acute psychosocial stress in healthy men and women. Biological Psychology 2012;90(2):143–9.
Layfield LJ. Classification, molecular characterization, and the significance of pten alteration in leiomyosarcoma. Sarcoma 2012;2012:380896.
Longo N. Diversity of approaches to classic galactosemia around the world: a comparison of diagnosis, intervention, and outcomes. Journal of Inherited Metabolic Disease 2012;35(6):1037–49.
Mao R. Correlation assessment among clinical phenotypes, expression analysis and molecular modeling of 14 novel variations in the human galactose-1-phosphate uridylyltransferase gene. Human Mutation 2012;33(7):1107–15.
Kushnir MM, Rockwood AL, Meikle AW. Cellular Pregnenolone Esterification by Acyl-CoA:Cholesterol Acyltransferase. Journal of Biological Chemistry 2012;287(21):17483–92.
Ridge PG. Composition and evolution of the vertebrate and Mammalian selenoproteomes. PLoS ONE 2012;7(3):e33066.
Salama M. Congenital and childhood myeloproliferative disorders with eosinophilia responsive to imatinib. Pediatric Blood and Cancer 2012;59(5):928–9.
Agarwal A. Zebrafish screen identifies novel compound with selective toxicity against leukemia. Blood 2012;119(24):5621–31.
Rodgers GM. A perspective on the evolution of management of cancer- and chemotherapy-induced anemia. Journal of the National Comprehensive Cancer Network 2012;10(4):434–7.
Strathmann FG. Iron deficiency disrupts axon maturation of the developing auditory nerve. Journal of Neuroscience 2012;32(14):5010–5.
Layfield LJ. HER2/neu Gene Amplification Heterogeneity: The Significance of Cells With a 3: 1 HER2/CEP17 Ratio. Applied Immunohistochemistry and Molecular Morphology 2012;20(6):543–9.
Damjanovich K, Bayrak-Toydemir P. Mosaicism in Stickler syndrome. European Journal of Medical Genetics 2012;55(6–7):418–22.
Copple SS, Jaskowski TD, Gardiner AE, Wilson AM, Hill HR. Screening for IgG antinuclear autoantibodies by HEp-2 indirect fluorescent antibody assays and the need for standardization. Clinical Chemistry 2012;137(5):825–30.
Kushnir MM. Patterns of endogenous steroids in apathetic refugee children are compatible with long-term stress. BMC Research Notes 2012;0.3375.
Hill HR. Evolving epidemiologic characteristics of invasive group a streptococcal disease in utah, 2002-2010. Clinical Infectious Diseases 2012;55(4):479–87.
Pyne MT, Hillyard DR. Comparison of three roche hepatitis B virus viral load assay formats. Journal of Clinical Microbiology 2012;50(7):2337–42.
Crockett DK, Kushnir MM, Cloud JL, Ashwood ER, Rockwood AL. Identification of histoplasma-specific peptides in human urine. International Journal of Peptides 2012;2012:621329.
Layfield LJ. Telangiectatic osteosarcoma. Archives of Pathology and Laboratory Medicine 2012;136(5):572–6.
Rodgers GM, Smock KJ. Prothrombin time, activated partial thromboplastin time and dilute Russell's Viper Venom times are not shorter in patients with the prothrombin G20210A mutation, and dilute Russell's Viper Venom time may be longer. Thrombosis Research 2012;130(3):e134–8.
Mitchell S, Bayrak-Toydemir P. Candidate locus analysis for PHACE syndrome. American Journal of Medical Genetics A 2012;158A(6):1363–7.
Margraf RL, Durtschi JD, Stephens JE, Perez M, Voelkerding KV. Determination of RET sequence variation in an MEN2 unaffected cohort using multiple-sample pooling and next-generation sequencing. Journal of Thyroid Research: edition Thyroid Oncology 2012;2012;318232.
Suh-Lailam BB, Tebo AE. APhL Antibody ELISA as an Alternative to Anticardiolipin Test for the Diagnosis of Antiphospholipid Syndrome. International Journal of Clinical and Experimental Pathology (IJCEP) 2012;5(3):210–5.
Rodgers GM. Cancer- and chemotherapy-induced anemia. Journal of the National Comprehensive Cancer Network 2012;10(5):628–53.
Rodgers GM. Total dose iron dextran infusion in cancer patients: is it SaFe2+? Journal of the National Comprehensive Cancer Network 2012;10(5):669–76.
Lu J, Grenache DG. Development of a rapid, microplate-based kinetic assay for measuring adenosine deaminase activity in body fluids. Clinica Chimica Acta 2012;413(19–20):1637–40.
Fischer KF. Macroarray detection of grapevine leafroll-associated viruses. Journal of Virological Methods 2012;183(2):161–9.
Johnson-Davis KL, Thompson C, McMillin GA, Lehman C. Method Comparison of the Ortho Vitros Fusion 5,1 chemistry analyzer and the Roche COBAS Integra 400 for Urine Drug Screen Testing in the Emergency Department. Journal of Analytical Toxicology 2012;36(5):345–8.
Hill HR. Successful use of extracorporeal membrane oxygenation for acute respiratory failure in a patient with chronic granulomatous disease. Journal of Pediatric Surgery 2012;47(5):e21–3..
Pyne MT, Wilson A, Hillyard DR. Large-scale comparison of Roche Cobas AmpliPrep/Cobas TaqMan and Abbott RealTime HIV assays. Journal of Virological Methods 2012;184(1–2):106–8.
Wallander ML. Molecular Testing in Malignant Melnaoma. Diagnostic Cytopathology 2012;40(6):503–10.
Chadwick BE. Beyond cytomorphology: Expanding the diagnostic potential for biliary cytology. Diagnostic Cytopathology 2012;40(6):536–41.
Wallander ML, Layfield LJ. Respiratory cytology in the era of molecular diagnostics: A review. Diagnostic Cytopathology 2012;40(6):556–63.
Rodgers GM. ADAMTS13 promotes angiogenesis and modulates VEGF-induced angiogenesis. Microvascular Research 2012;84(2):109–15.
Welch RJ, Merrigan SD, Delgado JC. A spectrophotometric method to precisely determine endpoint titers in complement fixation assays. Journal of Clinical Laboratory Analysis 2012;26(3):190–3.
Crockett DK, Ridge PG, Wilson AR, Lyon E. Consensus: a framework for evaluation of uncertain gene variants in laboratory test reporting. Genome Medicine 2012;4(5):48.
Nussenzveig RH, Salama ME, Agarwal AM, Perkins SL, Prchal JT. Detection of JAK2 Mutations in Paraffin Marrow Biopsies by High Resolution Melting Analysis: Identification of L611S alone and in cis with V617F in Polycythemia Vera. Leukemia and Lymphoma 2012;53(12):2479–86.
Rodgers GM. Prothrombin complex concentrates in emergency bleeding disorders. American Journal of Hematology 2012;87(9):898–902.
Bernard PS. TBCRC 001: Randomized Phase II Study of Cetuximab in Combination With Carboplatin in Stage IV Triple-Negative Breast Cancer. Journal of Clinical Oncology 2012;30(21):2615–23.
Petteys BJ, Frank EL. Performance characteristics of an LC-MS/MS method for the determination of plasma metanephrines. Clinica Chimica Acta 2012;413(19–20):1459–1465.
Martins TB, Hill HR. Circulating interferon-? correlates with 1,25(OH)D and the 1,25(OH)D-to-25(OH)D ratio. Cytokine 2012;60(1):23–6.
Pasquali M, Longo N. Glutaric acidemia Type 1: Outcomes before and after expanded newborn screening. Molecular Genetics and Metabolism 2012;106(4):430–8.
Hanson KE. Cytomegalovirus (CMV) reactivation following autologous peripheral blood stem cell transplantation for multiple myeloma in the era of novel chemotherapeutics and tandem transplantation. Biology of Blood and Marrow Transplantation 2012;18(11):1753–8.
Lyon E. A report template for molecular genetic tests designed to improve communication between the clinician and laboratory. Genetic Testing Molecular Biomarkers 2012;16(7):761–9.
Grenache DG. Taking candy from the baby. Clinical Chemistry 2012;58(7):1161–2.
Best DH. Genetics and pharmacogenomics in pulmonary arterial hypertension. Heart Failure Clinics 2012;8(3):319–30.
Johnson-Davis KL, Juenke JM, McMillin GA. Quantification of Tricyclic Antidepressants Using UPLC-MS/MS. Methods in Molecular Biology 2012;902:175–84.
Reading NS, Perkins SL, Prchal JT. Molecular heterogeneity of glucose-6-phosphate dehydrogenase deficiency in Gaza Strip Palestinians. Blood Cells, Molecules & Diseases 2012;49(3–4):152–8.
Bronner MP. Stromal galectin-1 expression is associated with long-term survival in resectable pancreatic ductal adenocarcinoma. Cancer Biology and Therapy 2012;13(10):899–907.
Marin SJ, McMillin GA. Rapid Screening for 67 Drugs and Metabolites in Serum or Plasma by Accurate-Mass LC-TOF/MS. Journal of Analytical Toxicology 2012;36(7):477–86.
Barakauskas VE, Davis R, McMillin GA. Unresolved discrepancies between cannabinoid test results in infant urine. Clinical Chemistry 2012;58(9):1364–7.
Marin SJ, McMillin GA. Sensitive UPLC-MS-MS Assay for 21 Benzodiazepine Drugs and Metabolites, Zolpidem and Zopiclone in Serum or Plasma. Journal of Analytical Toxicology 2012;36(7):472–6.
McMillin GA, Wilson A. Prospective pilot trial of PerMIT versus standard anticoagulation service management of patients initiating oral anticoagulation. Journal of Thrombosis and Haemostasis 2012;108(3):561–9.
Fisher MA. Rhodococcus erythropolis encephalitis in patient receiving rituximab. Emerging Infectious Diseases 2012;18(8):1377–9.
Nelson BE. Utility of phenylalanine hydroxylase genotype for tetrahydrobiopterin responsiveness classification in patients with phenylketonuria. Molecular Genetics and Metabolism 2012;107(1–2):31–6.
Tripp SR, Perkins SL. TP53 pathway analysis in paediatric Burkitt lymphoma reveals increased MDM4 expression as the only TP53 pathway abnormality detected in a subset of cases. British Journal of Haematology 2012;158(6):763–71.
Bronner MP. A Five-marker Panel in a Multiplex PCR Accurately Detects Microsatellite Instability-high Colorectal Tumors Without Control DNA. Diagnostic Molecular Pathology 2012;21(3):127–33.
Lyon E, Millson A. Medium chain acyl-CoA dehydrogenase deficiency detected among Hispanics by New Jersey newborn screening. American Journal of Medical Genetics A 2012;158A(9):2100–5.
Rowe LR, South ST. Differentiation of malignant melanoma from benign nevus using a novel genomic microarray with low specimen requirements. Archives of Pathology and Laboratory Medicine 2012;136(8):947–55.
Barker AP, Simmon KE, Slechta ES, Fisher MA, Schlaberg R. Isolation and identification of Kroppenstedtia eburnea isolates from multiple patient samples. Journal of Clinical Microbiology 2012;50(10):3391–4.
Hanson KE. ß-D-glucan surveillance with preemptive anidulafungin for invasive candidiasis in intensive care unit patients: a randomized pilot study. PLoS One 2012;7(8):e42282.
Perkins SL. Low-Dose Chemotherapy and Rituximab for Posttransplant Lymphoproliferative Disease (PTLD): A Children's Oncology Group Report. American Journal of Transplantation 2012;12(11):3069–3075.
Crockett DK (Round Robin-2 team). Second round robin for plasma hepcidin methods: First steps toward harmonization. American Journal of Hematology 2012;87(10):977–83.
Layfield LJ. Intraprocedural evaluation of fine-needle aspiration smears: How good are we? Diagnostic Cytopathology 2012;40(9):760–3.
Bahler DW. Whole-genome sequencing identifies recurrent somatic NOTCH2 mutations in splenic marginal zone lymphoma. Journal of Experimental Medicine 2012;209(9):1553–65.
Greene DN, Schmidt RL, Wilson AR, Grenache DG.. Cerebrospinal fluid myelin basic protein is frequently ordered but has little value: a test utilization study. American Journal of Clinical Pathology 2012;138(2):262–72.
Salama ME. Polymeric delivery of therapeutic RAE-1 plasmid to the pancreatic islets for the prevention of type 1 diabetes. Journal of Controlled Release 2012;162(3):606–11.
Melis R, Lewis T, Millson A, Lyon E, McMillin GA, Slev PR, Swensen J. Copy number variation and incomplete linkage disequilibrium interfere with the HCP5 genotyping assay for abacavir hypersensitivity. Genetic Testing and Molecular Biomarkers 2012;16(9):1111–4.
Couturier BA, Couturier MR. Association of Campylobacter upsaliensis with persistent bloody diarrhea. Journal of Clinical Microbiology 2012;50(11):3792–4.
Gu G. Inhibition of stathmin1 accelerates the metastatic process. Cancer Research 2012;72(20):5407–17.
Voelkerding KV. Opportunities and challenges associated with clinical diagnostic genome sequencing: a report of the association for molecular pathology. Journal of Molecular Diagnostics 2012;14(6):525–40.
Longo N, Pasquali M. Mutations in ABCD4 cause a new inborn error of vitamin B(12) metabolism. Nature Genetics 2012;44(10):1152–5.
Tebo AE, Jaskowski TD, Hill HR. Profiling anti-cyclic citrullinated peptide antibodies in patients with juvenile idiopathic arthritis. Pediatric Rheumatology Online Journal 2012;10(1):29.
Prchal JT. Somatic HIF2A gain-of-function mutations in paraganglioma with polycythemia. New England Journal of Medicine 2012;367(10):922–30.
Strathmann FG. Characterizing Antibody Cross-Reactivity for Immunoaffinity Purification of Analytes prior to Multiplexed Liquid Chromatography-Tandem Mass Spectrometry. Clinical Chemistry 2012;58(12):1711–6.
Kelley TW. Microarray, gene sequencing, and reverse transcriptase-polymerase chain reaction analyses of a cryptic PML-RARA translocation. Cancer Genetics 2012;205(10):537–40.
Kushnir MM, Rockwood AL, Crockett DK. Protein and Steroid Profiles in Follicular Fluid after Ovarian Hyper-Stimulation as Potential Biomarkers of IVF Outcome. Journal of Proteome Research 2012;11(10):5090–100.
Khot PD, Couturier MR, Fisher MA. Optimization of MALDI-TOF Mass Spectrometry Analysis for Bacterial Identification in Routine and Reference Settings. Journal of Clinical Microbiology 2012;50(12):3845–52.
Fisher MA. Rapid identification of pathogens from positive blood cultures by multiplex polymerase chain reaction using the FilmArray system. Diagnostic Microbiology and Infectious Disease 2012;74(4):349–55.
Layfield LJ, Jarboe EA.. Clinician compliance with laboratory regulations requiring submission of relevant clinical data: A one year retrospective analysis. Pathology, Research and Practice 2012;208(11):668–71.
Nussenzveig RH, Perkins S, Agarwal AM. Best Practices for Use of the HEMOX Analyzer in the Clinical Laboratory: Quality Control Determination and Choice of Anticoagulant. Lab Hematology 2012;18(3):17–9.
Nussenzveig RH, Agarwal AM. Development of a rapid multiplex PCR assay for identification of the three common Hemoglobin-Lepore variants (Boston-Washington, Baltimore, and Hollandia) and identification of a new Lepore variant. American Journal of Hematology 2012;87(10):E74–5.
Jarboe EA, Layfield LJ. Negative loop electrosurgical cone biopsy finding following a biopsy diagnosis of high-grade squamous intraepithelial lesion: frequency and clinical significance. Archives of Pathology and Laboratory Medicine 2012;136(10):1259–61.
Hill HR. Significance of C-reactive protein in osteoarthritis and total knee arthroplasty outcomes. Therapeutic Advances in Musculoskeletal Disease 2012;4(5):315–25.
Bahler DW. Detection of Merkel cell polyomavirus in chronic lymphocytic leukemia T-cells. Experimental and Molecular Pathology 2012;94(1):40–44.
Ridge PG. Mitochondrial Genomic Analysis of Late Onset Alzheimer's Disease Reveals Protective Haplogroups H6A1A/H6A1B: The Cache County Study on Memory in Aging. PLoS One 2012;7(9):e45134.
Astill M, Bernard PS, Rowe L. PAM50 Breast Cancer Subtyping by RT-qPCR and Concordance with Standard Clinical Molecular Markers. BMC Genomics 2012;5(1):44.
Pierce M, Meikle AW. Measurement of thyroid stimulating immunoglobulins using a novel thyroid stimulating hormone receptor-guanine nucleotide-binding protein, (GNAS) fusion bioassay. Thyroid 2012;170(2):115–21.
Meikle AW. Association of 25-hydroxy-vitamin D levels with semen and hormonal parameters. Asian Journal of Andrology 2012;14(6):855–9.
Salama ME. Identification and acute targeting of gaps in atrial ablation lesion sets using a real-time magnetic resonance imaging system. Circulation, Arrhythmia and Electrophysiology 2012;5(6):1130–5.
Meikle AW. Obesity and male infertility: a practical approach. Seminars in Reproductive Medicine 2012;30(6):486–95.
Slev P. Host genomics and HCV personalized medicine. Annals of Clinical and Laboratory Science 2012;42(4):363–9.
Layfield LJ. Solitary peripheral pulmonary papilloma evaluation on frozen section: A potential pitfall for the pathologist. Pathology, Research and Practice 2012;208(12):726–9.
Voelkerding KV. Assuring the quality of next-generation sequencing in clinical laboratory practice. Nature Biotechnology 2012;30(11):1033–6.
Wittwer CT. Monitoring Temperature with Fluorescence during Real-Time PCR and Melting Analysis. Analytical Biochemistry 2012;434(1):26–33.
Tebo AE. The entire predictive value of the prometheus IBD sgi diagnostic product may be due to the three least expensive and most available components. American Journal of Gastroenterology 2012;107(11):1760–1.
Layfield LJ. The comparative effectiveness of fine-needle aspiration cytology sampling policies: a simulation study. American Journal of Clinical Pathology 2012;138(6):823–30.
Fisher M. A novel human-infection-derived bacterium provides insights into the evolutionary origins of mutualistic insect-bacterial symbioses. PLoS Genetics 2012;8(11):e1002990.
Hill HR. An update on clinical immunology, immune mechanisms and deficiency diseases. Expert Review of Clinical Immunology 2012;8(8):729–31.
Layfield LJ. Characterization of synovial sarcoma calcification. American Journal of Roentgenology 2012;199(6):W730–4.
Prchal JT. Molecular basis of polycythemic disorders due to aberrant hypoxia sensing and its relevance to acute leukemia. Best Practice & Research, Clinical Haematology 2012;25(4):493–7.
Ravkov E, Pavlov IY, Hanson KE, Delgado JC. Validation of cytomegalovirus immune competence assays for the characterization of CD8+ T cell responses post-transplant. BMC Immunology 2012;2012:451059.