ARUP Journal Article Publications Archive—2011

The Institute for Clinical and Experimental Research® is focused on the development of new diagnostic assays in a wide range of disciplines. Researchers at the institute regularly publish in respected, peer-reviewed journals, give presentations at national and international organizations, author books and book chapters, and develop new tests.

There are 188 total entries for the year 2011.

Millson A, Lyon E. Southern analysis in fragile X testing. “Connections” Dako’s trade journal 2011;online only.
Pavlov IY, Delgado JC. Specificity of EIA Immunoassay for Complement Factor Bb Testing. Clinical Laboratory 2011;57(3–4):225–228.
Pavlov IY, Delgado JC. Urine TGF-ß1assay validation: spinning down urine samples could diminish TGF-ß1signal. Clinical Laboratory 2011;57:1027–1029.
Salama M. FCER2 (Fc fragment of IgE, low affinity II, receptor for (CD23). Atlas of Genetics and Cytogenetics in Oncology and Haematology 2011;online only.
Sumner K, Crockett D, Mallempati K, Best H, Mao R. The SPRED1 Variants Repository for Legius Syndrome. G3 Genes, Genomes, Genetics 2011;1(6):451–456.
Tebo AE, Smock KJ. Clinical laboratory testing for antiphospholipid syndrome. ASCP Check Sample 2011;51(3), No. CC11–3 (CC–393).
Bronner MP. Grading of gastric foveolar-type dysplasia in Barrett's esophagus. Modern Pathology 2011;23(1):1–11.
Kushnir MM, Rockwood Al, Roberts WL, Yue B, Meikle AW. Liquid chromatography tandem mass spectrometry for analysis of steroids in clinical laboratories. Clinical Biochemistry 2011;44(1):77–88.
Perkins SL. Autologous Peripheral Blood Stem Cell Transplantation in Children with Refractory or Relapsed Lymphoma: Results of Children's Oncology Group Study A5962. Biology of Blood and Marrow Transplantation 2011;17(2):249–58.
Jarboe EA, Layfield LJ. Cytologic features of pancreatic intraepithelial neoplasia and pancreatitis: Potential pitfalls in the diagnosis of pancreatic ductal carcinoma. Diagnostic Cytopathology 2011;39(8):575–81.
Petteys BJ, Frank EL. Rapid Determination of Vitamin B(2) (Riboflavin) in Plasma by HPLC. Clinica Chimica Acta 2011;412(1–2):38–43.
Wallander ML, Willmore-Payne C, Layfield LJ. C-KIT and PDGFRA Zygosity in Gastrointestinal Stromal Tumors: Correlation With Tumor Site, Tumor Size, Exon, and CD117 Immunohistochemistry. Applied Immunohistochemistry & Molecular Morphology 2011;19(1):21–7.
Bronner MP. Investigating neoplastic progression of ulcerative colitis with label-free comparative proteomics. Journal of Ptroteome Research 2011;10(1):200–9.
Shetty S, Salama ME. An Unusual Case of Cutaneous Blastic Plasmacytoid Dendritic Cell Neoplasm With Concomitant B-Cell Lymphoproliferative Disorder. American Journal of Dermatopathology 2011;33(3):e31–e36.
Prchal JT. Elevated tricuspid regurgitation velocity and decline in exercise capacity over 22 months of follow-up in children and adolescents with sickle cell anemia. Haematologica 2011;96(1):33–40.
Damjanovich K, Bayrak-Toydemir P. p.R672C Mutation of MYH3 Gene in an Egyptian Infant Presented with Freeman-Sheldon Syndrome. Indian Journal of Pediatrics 2011;78(1):103–5.
Nussenzveig R, Prchal JT. In Vitro and In Vivo Characterization of SGI-1252, a Small Molecule Inhibitor of JAK2. Experimental Hematology 2011;39(1):14–25.
Samowitz WS. Genetic variation in C-reactive protein (CRP) in relation to colon and rectal cancer risk and survival. International Journal of Cancer 2011;128(11):2726–34.
Prchal JT. Anti-inflammatory effect of methyl dehydrojasmonate (J2) is mediated by the NF-κB pathway. Journal of Molecular Medicine 2011;89(1):83–90..
Szankasi P, Ho AK, Bahler DW, Kelley TW. Combined testing for CCAAT/enhancer-binding protein alpha (CEBPA) mutations and promoter methylation in acute myeloid leukemia demonstrates shared phenotypic features. Leukemia Research 2011;35(2):200–207.
Shetty S. CCMG guidelines: prenatal and postnatal diagnostic testing for uniparental disomy. Clinical Genetics 2011;79(2):118–124.
Wyness SP, Hunsaker JJ, La'ulu SL, Roberts WL.. Reference intervals for six enzymes after polyethylene glycol precipitation and ultrafiltration. Clinica Chimica Acta 2011;412(11–12):1161–2.
Johnson-Davis KL, McMillin GA, Lehman CM. High amphetamine/methamphetamine concentrations in urine can cause error codes on the Ortho Vitros fusion 5,1 fs automated chemistry analyzer. Journal of Analytical Toxicology 2011;34(9):607–8.
Perkins S. BEACOPP chemotherapy is a highly effective regimen in children and adolescents with high-risk Hodgkin lymphoma: a report from the Children's Oncology Group. Blood 2011;117(9):2596–603.
Owen WE, Roberts WL. Performance Characteristics of a New Immulite® 2000 System Erythropoietin Assay. Clinica Chimica Acta 2011;412(5–6):480–2.
Ardon O, Longo N. Glycosylation of the OCTN2 carnitine transporter: Study of natural mutations identified in patients with primary carnitine deficiency. Biochimica et Biophysica Acta 2011;1812(3):312–20.
Jarboe EA. Serous carcinoma of the fallopian tube presenting as axillary lymphadenopathy. International Journal of Gynecological Pathology 2011;30(1):53–7.
Dobrowolski SF. Molecular genetics and impact of residual in vitro phenylalanine hydroxylase activity on tetrahydrobiopterin responsiveness in Turkish PKU population. Molecular Genetics and Metabolism 2011;102(2):116–21.
South ST. Clinical utility gene card for: Wolf-Hirschhorn (4p-) syndrome. European Journal of Human Genetics 2011;19(4).
Damjanovich K, Millson A, Wooderchak W, Gedge F, Bayrak-Toydemir P. Molecular diagnosis in hereditary hemorrhagic telangiectasia: findings in a series tested simultaneously by sequencing and deletion/duplication analysis. Clinical Genetics 2011;79(4):335–344.
Shirts BH, Wilson AR, Jackson BR. Partitioning Reference Intervals by Use of Genetic Information. Clinical Chemistry 2011;57(3):475–81.
Ashwood E. The clinical pathologist as consultant. Amer J Clin Pathol 2011;135:11–2.
Rector LS, Sederberg MC, Brothman AR. Visualization of fine-scale genomic structure by oligonucleotide-based high-resolution FISH. Cytogenetic and Genome Research 2011;132(4):248–54.
Marin SJ, McMillin GA. Nicotine and metabolites in paired umbilical cord tissue and meconium specimens. Therapeutic Drug Monitoring 2011;33(1):80–5.
Salama ME. Isolated post-transplantation lymphoproliferative disorder of the esophagus. Digestive and Liver Disease 2011;43(6):498.
Schwarz EL, Swensen J, Mao R, Pasquali M. Bone resorption in syndromes of the Ras/MAPK pathway. Clinical Genetics 2011;80(6):566–73.
South ST. Observation and prediction of recurrent human translocations mediated by NAHR between nonhomologous chromosomes. Genome Research 2011;21(1):33–46.
Marin SJ, Merrell M, McMillin GA. Drugs of abuse detection in meconium: a comparison between ELISA and biochip microarray. Journal of Analytical Toxicology 2011;35(1):40–5.
Greene DN, Lehman CM, McMillin GA. Evaluation of the integrated E-Z split key(®) cup II for rapid detection of twelve drug classes in urine. Journal of Analytical Toxicology 2011;35(1):46–53..
Fisher MA. Identification of HACEK clinical isolates by matrix-assisted laser desorption ionization-time of flight mass spectrometry. Journal of Clinical Microbiology 2011;49(3):1104–6.
Parnas ML, Procter M, Schwarz MA, Mao R, Grenache DG. Concordance of butyrylcholinesterase phenotype with genotype: implications for biochemical reporting. American Journal of Clinical Pathology 2011;135(2):271–6.
Rodgers GM. Immune-mediated Coagulopathy Associated With Topical Bovine Thrombin: Review of the Pediatric Literature. Journal of Pediatric Hematology Oncology 2011;33(2):86–8.
Bunker AM, Roberts WL. Age and gender specific pediatric reference intervals for aldolase, amylase, ceruloplasmin, creatine kinase, pancreatic amylase, prealbumin, and uric acid. Clinica Chemica Acta 2011;412(9–10):788–90.
Longo N. Using information prescriptions to refer patients with metabolic conditions to the Genetics Home Reference website. Journal of the Medical Library Association 2011;99(1):70–6.
Szankasi P, Kelley TW. Ncf1 (p47phox) is essential for direct regulatory T cell mediated suppression of CD4+ effector T cells. PLoS One 2011;6(1):e16013.
Chou LS. Implementation of a cost-effective unlabeled probe high-resolution melt assay for genotyping of factor v leiden. Genetic Testing and Molecular Biomarkers 2011;15(4):207–13.
Simmon KE, Khot PD, Fisher MA, She RC. Isolation and Characterization of "Pseudomonas andersonii" from Four Cases of Pulmonary Granulomas and Emended Species Description. Journal of Clinical Microbiology 2011;49(4):1518–23.
Prchal J. Extent of hematopoietic involvement by TET2 mutations in JAK2V617F polycythemia vera. Haematologica 2011;96(5):775–8..
Meikle AW. Sleep Apnea, reproductive hormones and quality of sexual life in severely obese men. Obesity 2011;19(6):1118–23.
Wyness SP, Hunsaker JJH, La'ulu SL, Roberts WL. Detection of macro-creatine kinase and macroamylase by polyethylene glycol precipitation and ultrafiltration methods. Clinica Chimica Acta 2011;412(23–24):2052–7.
Liu T. Utilization of unlabeled probes for the detection of fibroblast growth factor receptor 2 exons 7 and 12 mutations in endometrial carcinoma. Applied Immunohistochemistry and Molecular Morphology 2011;19(4):341–6.
Seipp MT, Wittwer CT. Detecting rare thrombophilia variants by high-resolution melting. Clinical Chemistry 2011;57(4):639–41.
Juenke JM, Johnson-Davis KL, McMillin GA. Simultaneous quantification of levetiracetam and gabapentin in plasma by ultra-pressure liquid chromatography coupled with tandem mass spectrometry detection. Therapeutic Drug Monitoring 2011;33(2):209–13.
Wittwer CT. uMELT: prediction of high-resolution melting curves and dynamic melting profiles of PCR products in a rich web application. Bioinformatics 2011;27(7):1019–20.
Tebo A. Non-criteria aPL tests: report of a task force and preconference workshop at the 13th International Congress on Antiphospholipid Antibodies, Galveston, TX, USA, April 2010. Lupus 2011;20(2):191–205.
Vaughn CP, Baker CL, Samowitz WS. Frequency of KRAS, BRAF, and NRAS mutations in colorectal cancer. Genes, Chromosomes and Cancer 2011;50(5):307–12.
Merrigan SD, Welch RJ, Litwin CM. Comparison of Western Immunobloting to an Enzyme-Linked Immunosorbent Assay for the Determination of Anti-Bordetella pertussis Antibodies. Clinical and Vaccine Immunology 2011;18(4):615–20.
Longo N, Ardon O, Schwartz E, Pasquali M. Disorders of creatine transport and metabolism. American Journal of Medical Genetics 2011;157(1):72–8.
Brothman AR. Prognostic value of an RNA expression signature derived from cell cycle proliferation genes in patients with prostate cancer: a retrospective study. Lancet Oncology 2011;12(3):245–55.
Prchal JT. Allogeneic haematopoietic cell transplantation for myelofibrosis in 30 patients 60-78 years of age. British Journal of Haematology 2011;153(1):76–82.
Stevenson JB, Hymas WC, Hillyard DR. A novel capillary electrophoresis-based multiplex PCR assay for detection of respiratory pathogens. Annals of Clinical and Laboratory Science 2011;41(1):33–8.
Jaskowski TD, Hill HR. Dermatitis herpetiformis sera or goat anti-transglutaminase-3 transferred to human skin-grafted mice mimics dermatitis herpetiformis immunopathology. Journal of Immunology 2011;186(7):4474–80.
Pasquali M, Longo N. Newborn screening and inborn errors of metabolism. American Journal of Medical Genetics 2011;157(1):1–2.
La'ulu SL, Roberts WL. Ethnic Differences in First Trimester Thyroid Reference Intervals. Clinical Chemistry 2011;57(6):913–5.
Bayrak-Toydemir P. RASA1 related disorders. Gene Reviews 2011;.
Nussenzveig R, Prchal JT. Molecular basis of two novel mutations found in type I methemoglobinemia. Blood Cells, Molecules & Diseases 2011;46(4):277–81.
Bronner MP. Using optical markers of nondysplastic rectal epithelial cells to identify patients with ulcerative colitis-associated neoplasia. Inflammable Bowel Disease 2011;17(12):2427–35.
Wilson A, Suh-Lailam B, Tebo AE. Significant differences in the analytic concordance between anti-dsDNA IgG antibody assays for the diagnosis of systemic lupus erythematosus-Implications for inter-laboratory testing. Clinica Chemica Acta 2011;412(11–12):1076–80.
Wyness SP, La'ulu SL, Roberts WL. First-trimester reference intervals for thyrotropin, free thyroxine, free thyroxine index and thyroid hormone binding ratio for the Beckman Coulter UniCel® DxI 800 and Roche Modular Analytics E170 analyzers. Chlinica Chimica Acta 2011;412(23–24):2346–8.
Bronner MP. Ulcerative colitis-associated colorectal cancer arises in a field of short telomeres, senescence, and inflammation. Cancer Research 2011;71(5):1669–79..
Prchal J. Oligomerization of a Retroviral Matrix Protein Is Facilitated by Backbone Flexibility on Nanosecond Time Scale. Journal of Physical Chemistry 2011;115(11):2634–2644.
Prchal JT. Hypoxia and Hematopoiesis. American Journal of Physiology Cell Physiology 2011;300(6):C1215–22.
Jaskowski TD, Wilson A, Hill HR, Tebo AE. Diagnostic assays for Anti-PM/Scl IgG antibodies: Heterogeneity in antibody response or lack of standardization? Arthritis Research and Therapy 2011;412(11–12):1100–5.
Best DH, Vaughn C, Damjanovich K, Bayrak-Toydemir P. Mosaic ACVRL1 and ENG mutations in hereditary haemorrhagic telangiectasia patients. American Journal of Medical Genetics 2011;48(5):358–60.
McMillin GA, Melis R. Evaluation of a CYP2C19 genotype panel on the GenMark eSensor® platform and the comparison to the Autogenomics Infinitiâ„¢ and Luminex CYP2C19 panels. Clinica Chimica Acta 2011;412(11–12):1133–7.
Tripp SR, Perkins SL. Merkel cell polyomavirus (MCPyV) in chronic lymphocytic leukemia/small lymphocytic lymphoma. Leukemia Research 2011;35(5):689–92.
Roberts WL. A multicenter study of [-2]pro-prostate specific antigen combined with prostate specific antigen and free prostate specific antigen for prostate cancer detection in the 2.0 to 10.0 ng/ml prostate specific antigen range. Journal of Urology 2011;185(5):1650–5.
Ray JA, Kushnir MM, Rockwood AL, Meikle AW. Analysis of Cortisol, Cortisone and Dexamethasone in human serum using Liquid Chromatography Tandem Mass Spectrometry and Assessment of Cortisol: Cortisone Ratios in patients with Impaired Kidney Function. Clinica Chimica Acta 2011;412(13–14):1221–8.
Rodgers GM, Smock KJ. Prevalence of heparin in samples submitted for lupus anticoagulant testing. Lab Hematology 2011;17(1):6–11.
Martins TB, Hill HR. Vitamins E and C Modulate the Association Between Reciprocally Regulated Cytokines After an Anterior Cruciate Ligament Injury and Surgery. American Journal of Physical Medicine and Rehabilitation 2011;90(8):638–647.
Lyon E. The GeneInsight Suite: a platform to support laboratory and provider use of DNA-based genetic testing. Human Mutation 2011;32(5):532–6.
Bronner MP. Protein alterations associated with pancreatic cancer and chronic pancreatitis found in human plasma using global quantitative proteomics profiling. Journal of Proteome Research 2011;10(5):2359–76.
Samowitz WS. Nutrients in Folate-Mediated, One-Carbon Metabolism and the Risk of Rectal Tumors in Men and Women. Nutrition and Cancer. Nutrition and Cancer 2011;63:3, 357–366.
Geiersbach K, Salama M, Shetty S. Multi-hit lymphoma with intermediate features and novel t(3;8)(q27;q24) not involving MYC. Leukemia and Lymphoma 2011;52(5):922–9..
Schwarz EL, Pasquali M. Multiple increased osteoclast functions in individuals with neurofibromatosis type 1. American Journal of Medical Genetics A 2011;155A(5):1050–9.
Rockwood AL. Performance of a halo ion trap mass analyzer with exit slits for axial ejection. Journal for the American Society of Mass Spectrometry 2011;22(2):369–78.
Straseski JA. StrataGraft skin substitute is well-tolerated and is not acutely immunogenic in patients with traumatic wounds: results from a prospective, randomized, controlled dose escalation trial. Annals of Surgery 2011;253(4):672–83.
Bronner MP. The esophageal wall. Thoracic Surgery Clinics 2011;21(2):299–305.
Wallander ML, Layfield LJ, Mamalis N, Davis D, Tripp S, Holden JA. KIT mutations in ocular melanoma: frequency and anatomic distribution. Modern Pathology 2011;24(8):1031–5.
Crockett DK, Ridge PG, Margraf RL, Lyon E. Predicting phenotypic severity of uncertain gene variants in the RET proto-oncogene. PLoS One 2011;6(3):e18380.
Schumacher JA, Szankasi P, Bahler DW,Kelley TW. A pyrosequencing-based test for detection and relative quantitation of the BCR-ABL1 T315I point mutation. American Journal of Clinical Pathology 2011;64(7):618–25.
Perkins S. Minimal disease assessment in the treatment of children and adolescents with intermediate-risk (Stage III/IV) B-cell non-Hodgkin lymphoma: a children's oncology group report. British Journal of Haematology 2011;153(6):758–63.
Bayrak-Toydemir P, Lyon E, Mao R, Voelkerding KV. The Association for Molecular Pathology's approach to supporting a global agenda to embrace personalized genomic medicine. Journal of Molecular Diagnostics 2011;13(3):249–51.
Greene DN, Procter M, Grenache DG, Lyon E, Mao R. Misclassification of an apparent alpha 1-antitrypsin. Clinica Chimica Acta 2011;412(15–16):1454–6.
Wilson AM, Tebo AE, Hill HR. Enzyme-linked immunosorbent assay screening then indirect immunofluorescence confirmation of antinuclear antibodies: a statistical analysis. American Journal of Clinical Pathology 2011;135(5):678–84.
Jarboe EA, Layfield L. Detection of human papillomavirus using hybrid capture 2 in oral brushings from patients with oropharyngeal squamous cell carcinoma. American Journal of Clinical Pathology 2011;135(5):766–9..
Brothman AR. Cytogenomic aberrations associated with prostate cancer. Cancer Genetics 2011;204(2):57–67.
Delgado JC. Celiac disease and HLA typing using real-time PCR with melting curve analysis. Tissue Antigens 2011;78(1):31–7.
Grenache DG, Lu J. The Relationship between PTH and 25-Hydroxy Vitamin D Early in Pregnancy. Clinical Endocrinology 2011;75(3):309–14.
Geiersbach K, Rector LS, Sederberg M, South ST. Unknown partner for USP6 and unusual SS18 rearrangement detected by fluorescence in situ hybridization in a solid aneurysmal bone cyst. Cancer Genetics 2011;204(4):195–202.
Schlaberg R, Bunker AM, Singh IR. Absence of XMRV retrovirus and other murine leukemia virus-related viruses in patients with chronic fatigue syndrome. Journal of Virology 2011;85(14):7195–202.
Juenke JM, McMillin GA, Johnson-Davis KL. An automated method for supporting busulfan therapeutic drug monitoring. Journal of Therapeutic Drug Monitoring 2011;33(3):315–20.
Bayrak-Toydemir P. Hereditary hemorrhagic telangiectasia: An overview of diagnosis, management, and pathogenesis. Genetics in Medicine 2011;13(7):607–16.
Wilson A, Roberts WL, Pavlov. Patient result median monitoring for clinical laboratory quality control. Clinica Chemica Acta 2011;412(15–16):1441–6.
Longo N. Correlation of age-specific phenylalanine levels with intellectual outcome in patients with phenylketonuria. Journal of Inherited Metabolic Disease 2011;34(4):963–71.
Samowitz WS. CpG island methylation in colorectal cancer: past, present and future. Pathology Research International 2011;2011:902674..
Wilson A. Cytomegalovirus DNA quantification using an automated platform for nucleic Acid extraction and real-time PCR assay setup. Journal of Clinical Microbiology 2011;49(7):2703–5.
McMillin GA, Juenke JM. Discordant carbamazepine values between two immunoassays: carbamazepine values determined by ADVIA centaur correlate better with those determined by LC-MS/MS than PETINIA assay. Journal of Clinical Laboratory Analysis 2011;25(3):212–6.
Brothman AR. Craniorachischisis and omphalocele in a stillborn cynomolgus monkey (Macaca fascicularis). American Journal of Medical Genetics A 2011;155A(6):1367–73.
South S. A deletion 13q34/duplication 14q32.2-14q32.33 syndrome diagnosed 50 years after neonatal presentation as infantile hypercalcemia. American Journal of Medical Genetics A 2011;155A(4):833–9.
Prchal JT. The heterozygote advantage of the Chuvash polycythemia VHLR200W mutation may be protection against anemia. Haematologica 2011;96(9):1371–4.
Herrmann MG, Sandrock TM. The 104-Well Microplate. Journal of Laboratory Automation 2011;16(3):214–20.
Bernard PS. High quality and quantity Genome-wide germline genotypes from FFPE normal tissue. BMC Research Notes 2011;4(1):159.
Vaughn CP, Samowitz WS, Swensen JJ. Avoidance of pseudogene interference in the detection of 3' deletions in PMS2. Human Mutation 2011;32(9):1063–71.
Brothman AR. College of American Pathologists/American College of Medical Genetics proficiency testing for constitutional cytogenomic microarray analysis. Genetics in Medicine 2011;13(9):765–9.
La'ulu SL, Rasmussen KJ, Roberts WL. Pediatric reference intervals for serum alpha-fetoprotein. Clinica Chimica Acta 2011;412(17–18):1695–6.
Roberts WL, Bunker AM. Pediatric 25-hydroxyvitamin D concentrations in neurofibromatosis type 1. Journal of Pediatric Endocrinology and Metabolism 2011;24(3–4):169–74.
Juenke JM, Johnson-Davis KL, McMillin GA. Performance characteristics of the ARK diagnostics gabapentin immunoassay. Journal of Therapeutic Drug Monitoring 2011;33(4):398–401.
Bronner MP. Durability of Radiofrequency Ablation in Barrett's Esophagus with Dysplasia. Gastroenterology 2011;141(2):460–8.
South ST. American College of Medical Genetics recommendations for the design and performance expectations for clinical genomic copy number microarrays intended for use in the postnatal setting for detection of constitutional abnormalities. Genetics in Medicine 2011;13(7):676–9.
South ST. American College of Medical Genetics standards and guidelines for interpretation and reporting of postnatal constitutional copy number variants. Genetics in Medicine 2011;13(7):680–5.
Wilson AR, Layfield LJ. A systematic review and meta-analysis of the diagnostic accuracy of fine-needle aspiration cytology for parotid gland lesions. American Journal of Clinical Pathology 2011;136(1):45–59.
Wooderchak-Donahue WL, Vaughn C, Chou LS, Lewis T, Sumner K, Procter M, Gedge F, Bayrak-Toydemir P, Lyon E, Pont-Kingdon G. Verification of Multiplex Ligation-Dependent Probe Amplification (MLPA) Probes in the Absence of Positive Samples. Genetic Testing and Molecular Biomarkers 2011;15(11):793–9.
Juenke JM, McMillin GA, Johnson-Davis KL. A comparison of two FDA approved lamotrigine immunoassays with ultra-high performance liquid chromatography tandem mass spectrometry. Clinica Chimica Acta 2011;412(19–20):1879–82.
Wooderchak WL. Investigation of the molecular origins of protein-arginine methyltransferase I (PRMT1) product specificity reveals a role for two conserved methionine residues. Journal of Biological Chemistry 2011;286(33):29118–26.
South ST, Swensen JJ. Using VAAST to Identify an X-Linked Disorder Resulting in Lethality in Male Infants Due to N-Terminal Acetyltransferase Deficiency. American Journal of Human Genetics 2011;89(1):28–43.
Melis R, Fauron C, McMillin G, Lyon E, Shirts B, Hubley LM, Slev PR. Simultaneous genotyping of rs12979860 and rs8099917 variants near the IL28B locus associated with HCV clearance and treatment response. Journal of Molecular Diagnostics 2011;13(4):446–451.
Mallory MA. Development and validation of a hepatitis B virus DNA sequencing assay for assessment of antiviral resistance, viral genotype and surface antigen mutation status. Journal of Virological Methods 2011;177(1):31–7.
Slev PR. Cerebrospinal fluid oligoclonal bands in childhood opsoclonus-myoclonus. Pediatric Neurology 2011;45(1):27–33.
Prchal J. Down-regulation of the RUNX1-target gene NR4A3 contributes to hematopoiesis deregulation in familial platelet disorder/acute myelogenous leukemia. Blood 2011;118(24):6310–20.
Ho AK,. Assessment of Depression, Anxiety and Apathy in Prodromal and Early Huntington Disease. PLoS Currents 2011;3:RRN1242.
Margraf RL, Durtschi JD, Dames S, Pattison DC, Stephens JE, Voelkerding KV. Variant identification in multi-sample pools by illumina genome analyzer sequencing. Journal of Biomolecular Tech 2011;22(2):74–84.
Johnson-Davis KL, McMillin GA. Evaluation of the Abbott ARCHITECT i2000 sirolimus assay and comparison with the Abbott IMx sirolimus assay and an established liquid chromatography-tandem mass spectrometry method. Therapeutic Drug Monitoring 2011;33(4):453–9.
Juenke JM, McMillin GA. Rapid and specific quantification of ethylene glycol: adaptation of a commercial enzymatic assay to automated chemistry analyzers. American Journal of Clinical Pathology 2011;136(2):318–24.
Strathmann FG. Use of the BD vacutainer rapid serum tube reduces false-positive results for selected beckman coulter Unicel DxI immunoassays. American Journal of Clinical Pathology 2011;136(2):325–9.
Strathmann FG. Quantification of 1a,25-dihydroxy vitamin D by immunoextraction and liquid chromatography-tandem mass spectrometry. Clinical Chemistry 2011;57(9):1279–85.
Wittwer CT. Snapback Primer Genotyping of the Gilbert Syndrome UGT1A1 (TA)n Promoter Polymorphism by High-Resolution Melting. Clinical Chemistry 2011;57(9):1303–10.
Strathmann FG. Simulations of delta check rule performance to detect specimen mislabeling using historical laboratory data. Clinica Chimica Acta 2011;412(21–22):1973–7.
She RC, Welch R, Wilson AR, Davis D, Litwin CM.. Correlation of Chlamydia and Chlamydophila spp. IgG and IgM antibodies by microimmunofluorescence with antigen detection methods. Journal of Clinical Laboratory Analysis 2011;25(4):305–8.
Khot PD. Comparison of quantitative real time PCR with Sequencing and ribosomal RNA-FISH for the identification of fungi in Formalin fixed, paraffinembedded tissue specimens. BMC Infectious Diseases 2011;0.59861111111.
Prchal JT. Convergent mechanisms of somatic mutations in polycythemia vera. Discovery Medicine 2011;12(62):25–32.
Roberts WL. Commentary. Clinical Chemistry 2011;57(8):1107.
Bronner MP. Backwash ileitis does not affect pouch outcome in patients with ulcerative colitis with restorative proctocolectomy. Clinical Gastroenterology and Hepatology 2011;9(11):981–8.
Smock KJ, Rodgers GM. Laboratory evaluation of clopidogrel responsiveness by platelet function and genetic methods. American Journal of Hematology 2011;86(12):1032–4.
Erickson JA, Grenache DG. Comparison of Three Assays for Quantifying S-100B in Serum. Clinica Chimica Acta 2011;412(23–24):2122–7.
Ridge PG. Association and expression analyses with single-nucleotide polymorphisms in TOMM40 in Alzheimer disease. Archives of Neurology 2011;68(8):1013–9.
Prchal JT. Interferon and PV stem cells. Blood 2011;118(6):1429–30.
Bronner MP. Does Neoadjuvant Therapy Alter KRAS and/or MSI Results in Rectal Adenocarcinoma Testing? American Journal of Surgical Pathology 2011;35(9):1327–30.
Agarwal AM, Smock KJ, Bahler D, Perkins SL. Diffuse Large B-cell Lymphoma With Aberrant Expression of the T-cell Antigens CD2 and CD7. Applied Immunohistochemistry and Molecular Morphology 2011;19(6):579–83.
Hill HR. Partial immune reconstitution of X-linked hyper IgM syndrome with recombinant CD40 ligand. Blood 2011;118(14):3811–7.
Bayrak-Toydemir P. Familial clustering of hemangiomas. Archives of otolaryngology--head & neck surgery 2011;137(8):757–60.
South ST, Brothman AR. An evidence-based approach to establish the functional and clinical significance of copy number variants in intellectual and developmental disabilities. Genetics in Medicine 2011;13(9):777–84.
Samowitz WS. Lynch syndrome screening implementation: business analysis by a healthcare system. American Journal of Managed Care 2011;17(8):e288–300.
Owen WE, Rockwood AF, Roberts WL. Functional sensitivity of seven automated thyroid stimulating hormone immunoassays. Clinica Chimica Acta 2011;412(23–24):2336–9.
Held PK, Pasquali M. Quantitative urine amino acid analysis using liquid chromatography tandem mass spectrometry and aTRAQ reagents. Journal of Chromatography B- Analytical Technologies in the Biomedical and Life Sciences 2011;879(26):2695–703.
Prchal JT. Chuvash polycythemia VHLR200W mutation is associated with downregulation of hepcidin expression. Blood 2011;118(19):5278–82.
Smock KJ. Antiphospholipid antibody syndrome. Archives of Pathology and Laboratory Medicine 2011;135(9):1092–6.
Bronner M,. Lynch syndrome screening in newly diagnosed colorectal cancer in general pathology practice: from the revised Bethesda guidelines to a universal approach. Scandinavian Journal of Gastroenterology 2011;46(11):1340–8.
Smock KJ, Rodgers GM. Hospital-based clinical implications of the novel oral anticoagulant, dabigatran etexilate, in daily practice. Hospital Practice 2011;39(3):23–34.
Hanson K. Increasing incidence of invasive Haemophilus influenzae disease in adults, Utah, USA. Emerging Infectious Diseases 2011;17(9):1645–50.
Simmon KE, Ridge P, Durtschi JD Slechta ES, Voelkerding K. Mycobacterium chelonae-abscessus Complex Associated with Sinopulmonary Disease, Northeastern USA. Emerging Infectious Diseases 2011;17(9):1692–700.
Fisher MA. Recovery of a catalase-negative Staphylococcus epidermidis strain in blood and urine cultures from a patient with pyelonephritis. American Journal of Clinical Pathology 2011;49(11):4018–9.
Roberts WL. FGF-23 associates with death, cardiovascular events, and initiation of chronic dialysis. Journal of the American Society of Nephrology 2011;22(10):1913–22.
Rockwood AL, Johnson-Davis KL. Mass spectrometry for clinical toxicology: therapeutic drug management and trace element analysis. Clinics in Laboratory Medicine 2011;31(3):407–28.
Layfield LJ. A systematic review and meta-analysis of the diagnostic accuracy of ultrasound-guided core needle biopsy for salivary gland lesions. American Journal of Clinical Pathology 2011;136(4):516–26.
Strathmann FG. Current and future applications of mass spectrometry to the clinical laboratory. American Journal of Clinical Patholog 2011;136(4):609–16.
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