ARUP's Laboratory Test Directory

Ornithine Transcarbamylase Deficiency (OTC) Sequencing : 2004901
[ image for: Patient History for Ornithine Transcarbamylase Deficiency (OTC) Testing]
Patient History for Ornithine Transcarbamylase Deficiency (OTC) Testing
  


Mnemonic: OTC FGS

Methodology: Polymerase Chain Reaction/Sequencing
Performed: Varies
Reported: 21 days
Specimen Required: Collect: Lavender (EDTA), pink (K2EDTA), or yellow (ACD Solution A or B).

Specimen Preparation: Transport 3 mL whole blood. (Min: 1 mL)

Storage/Transport Temperature: Refrigerated.

Stability (collection to initiation of testing): Ambient: 72 hours; Refrigerated: 1 week; Frozen: Unacceptable

Interpretive Data: Background Information for Ornithine Transcarbamylase Deficiency (OTC) Sequencing:
Characteristics:
Classic OTC deficiency is a urea cycle disorder characterized by hyperammonemia, cyclical vomiting, seizures, lethargy, coma and neonatal death if not treated. Clinical presentation varies widely in females, and some males can have non-classical forms.
Incidence:
Approximately 1 in 20,000.
Inheritance:
X-linked.
Penetrance:
Variable depending on sex and mutation.
Cause:
Pathogenic OTC gene mutations.
Clinical Sensitivity:
Approximately 80 percent.
Methodology:
Bidirectional sequencing of the entire OTC coding region and intron/exon boundaries.
Analytical Sensitivity and Specificity
: 99 percent.
Limitations:
Rare diagnostic errors can occur due to primer site mutations. Regulatory region mutations and deep intronic mutations will not be detected in individuals of both sexes; large deletions/duplications will not be detected in females.



Counseling and informed consent are recommended for genetic testing. Consent forms are available online at www.aruplab.com.

Refer to Statement C under Testing Information at http://www.aruplab.com.
CPT Code(s): 83891 Isolation; 83898 x10 Amplification; 83904 x10 Sequencing; 83909 Capillary electrophoresis; 83912 Interpretation and report - Additional CPT code modifiers may be required for procedures performed to test for oncologic or inherited disorders.
Cross References: OTC Sequencing (Ornithine Transcarbamylase Deficiency (OTC) Sequencing) , Urea Cycle Defect (Ornithine Transcarbamylase Deficiency (OTC) Sequencing)
 
 

 

 

 
All ARUP Sites:        www.aruplab.com     ·     www.arupconsult.com     ·     www.arup.utah.edu     ·     www.childx.org     ·     www.utahblood.org